mvstore.html 33.2 KB
Newer Older
1 2
<!DOCTYPE html PUBLIC "-//W3C//DTD XHTML 1.0 Strict//EN" "http://www.w3.org/TR/xhtml1/DTD/xhtml1-strict.dtd">
<!--
3
Copyright 2004-2014 H2 Group. Multiple-Licensed under the MPL 2.0, Version 1.0,
4 5 6 7 8
and under the Eclipse Public License, Version 1.0
Initial Developer: H2 Group
-->
<html xmlns="http://www.w3.org/1999/xhtml" lang="en" xml:lang="en">
<head><meta http-equiv="Content-Type" content="text/html;charset=utf-8" /><title>
9
MVStore
10 11 12 13 14 15 16 17 18 19 20 21
</title><link rel="stylesheet" type="text/css" href="stylesheet.css" />
<!-- [search] { -->
<script type="text/javascript" src="navigation.js"></script>
</head><body onload="frameMe();">
<table class="content"><tr class="content"><td class="content"><div class="contentDiv">
<!-- } -->

<h1>MVStore</h1>
<a href="#overview">
    Overview</a><br />
<a href="#example_code">
    Example Code</a><br />
Thomas Mueller's avatar
Thomas Mueller committed
22 23 24 25
<a href="#store_builder">
    Store Builder</a><br />
<a href="#r_tree">
    R-Tree</a><br />
Thomas Mueller's avatar
Thomas Mueller committed
26

27 28
<a href="#features">
    Features</a><br />
Thomas Mueller's avatar
Thomas Mueller committed
29 30 31 32 33 34 35 36 37
<a href="#maps">- Maps</a><br />
<a href="#versions">- Versions</a><br />
<a href="#transactions">- Transactions</a><br />
<a href="#inMemory">- In-Memory Performance and Usage</a><br />
<a href="#dataTypes">- Pluggable Data Types</a><br />
<a href="#blob">- BLOB Support</a><br />
<a href="#pluggableMap">- R-Tree and Pluggable Map Implementations</a><br />
<a href="#caching">- Concurrent Operations and Caching</a><br />
<a href="#logStructured">- Log Structured Storage</a><br />
38
<a href="#offHeap">- Off-Heap and Pluggable Storage</a><br />
Thomas Mueller's avatar
Thomas Mueller committed
39 40 41 42
<a href="#fileSystem">- File System Abstraction, File Locking and Online Backup</a><br />
<a href="#encryption">- Encrypted Files</a><br />
<a href="#tools">- Tools</a><br />
<a href="#exceptionHandling">- Exception Handling</a><br />
Thomas Mueller's avatar
Thomas Mueller committed
43
<a href="#storageEngine">- Storage Engine for H2</a><br />
Thomas Mueller's avatar
Thomas Mueller committed
44

45 46 47
<a href="#fileFormat">
    File Format</a><br />

48 49 50 51 52 53 54 55
<a href="#differences">
    Similar Projects and Differences to Other Storage Engines</a><br />
<a href="#current_state">
    Current State</a><br />
<a href="#requirements">
    Requirements</a><br />

<h2 id="overview">Overview</h2>
56 57
<p>
The MVStore is work in progress, and is planned to be the next storage subsystem of H2.
Thomas Mueller's avatar
Thomas Mueller committed
58
But it can also be used directly within an application, without using JDBC or SQL.
59
</p>
60
<ul><li>MVStore stands for "multi-version store".
Thomas Mueller's avatar
Thomas Mueller committed
61
</li><li>Each store contains a number of maps that can be accessed using the <code>java.util.Map</code> interface.
62
</li><li>Both file-based persistence and in-memory operation are supported.
63 64
</li><li>It is intended to be fast, simple to use, and small.
</li><li>Old versions of the data can be read concurrently with all other operations.
Thomas Mueller's avatar
Thomas Mueller committed
65
</li><li>Transactions are supported (including concurrent transactions and 2-phase commit).
Thomas Mueller's avatar
Thomas Mueller committed
66
</li><li>The tool is very modular.
Thomas Mueller's avatar
Thomas Mueller committed
67
    It supports pluggable data types and serialization,
Thomas Mueller's avatar
Thomas Mueller committed
68
    pluggable storage (to a file, to off-heap memory),
Thomas Mueller's avatar
Thomas Mueller committed
69
    pluggable map implementations (B-tree, R-tree, concurrent B-tree currently),
Thomas Mueller's avatar
Thomas Mueller committed
70
    BLOB storage,
71
    and a file system abstraction to support encrypted files and zip files.
72 73 74
</li></ul>

<h2 id="example_code">Example Code</h2>
75
<p>
Thomas Mueller's avatar
Thomas Mueller committed
76
The following sample code shows how to use the tool:
77
</p>
78
<pre>
Thomas Mueller's avatar
Thomas Mueller committed
79 80
import org.h2.mvstore.*;

81 82 83
// open the store (in-memory if fileName is null)
MVStore s = MVStore.open(fileName);

84
// create/get the map named "data"
85
MVMap&lt;Integer, String&gt; map = s.openMap("data");
86

Thomas Mueller's avatar
Thomas Mueller committed
87 88 89
// add and read some data
map.put(1, "Hello World");
System.out.println(map.get(1));
90

Thomas Mueller's avatar
Thomas Mueller committed
91
// close the store (this will persist changes)
92 93 94
s.close();
</pre>

Thomas Mueller's avatar
Thomas Mueller committed
95
<h2 id="store_builder">Store Builder</h2>
96
<p>
97
The <code>MVStore.Builder</code> provides a fluid interface
Thomas Mueller's avatar
Thomas Mueller committed
98
to build a store if configuration options are needed.
Thomas Mueller's avatar
Thomas Mueller committed
99
Example usage:
100 101
</p>
<pre>
102
MVStore s = new MVStore.Builder().
Thomas Mueller's avatar
Thomas Mueller committed
103
    fileName(fileName).
Thomas Mueller's avatar
Thomas Mueller committed
104
    encryptionKey("007".toCharArray()).
105
    compress().
106 107
    open();
</pre>
Thomas Mueller's avatar
Thomas Mueller committed
108 109 110 111 112
<p>
The list of available options is:
</p>
<ul><li>autoCommitBufferSize: the size of the write buffer.
</li><li>autoCommitDisabled: to disable auto-commit.
Thomas Mueller's avatar
Thomas Mueller committed
113
</li><li>backgroundExceptionHandler: a handler for
Thomas Mueller's avatar
Thomas Mueller committed
114 115
    exceptions that could occur while writing in the background.
</li><li>cacheSize: the cache size in MB.
116 117 118 119
</li><li>compress: compress the data when storing
    using a fast algorithm (LZF).
</li><li>compressHigh: compress the data when storing
    using a slower algorithm (Deflate).
Thomas Mueller's avatar
Thomas Mueller committed
120
</li><li>encryptionKey: the key for file encryption.
Thomas Mueller's avatar
Thomas Mueller committed
121
</li><li>fileName: the name of the file, for file based stores.
Thomas Mueller's avatar
Thomas Mueller committed
122
</li><li>fileStore: the storage implementation to use.
Thomas Mueller's avatar
Thomas Mueller committed
123
</li><li>pageSplitSize: the point where pages are split.
Thomas Mueller's avatar
Thomas Mueller committed
124 125
</li><li>readOnly: open the file in read-only mode.
</li></ul>
126

Thomas Mueller's avatar
Thomas Mueller committed
127
<h2 id="r_tree">R-Tree</h2>
128 129
<p>
The <code>MVRTreeMap</code> is an R-tree implementation
130
that supports fast spatial queries. It can be used as follows:
131 132 133 134 135
</p>
<pre>
// create an in-memory store
MVStore s = MVStore.open(null);

136
// open an R-tree map
137 138
MVRTreeMap&lt;String&gt; r = s.openMap("data",
        new MVRTreeMap.Builder&lt;String&gt;());
139 140 141 142 143 144 145 146

// add two key-value pairs
// the first value is the key id (to make the key unique)
// then the min x, max x, min y, max y
r.add(new SpatialKey(0, -3f, -2f, 2f, 3f), "left");
r.add(new SpatialKey(1, 3f, 4f, 4f, 5f), "right");

// iterate over the intersecting keys
147
Iterator&lt;SpatialKey&gt; it =
148 149 150 151 152 153 154
        r.findIntersectingKeys(new SpatialKey(0, 0f, 9f, 3f, 6f));
for (SpatialKey k; it.hasNext();) {
    k = it.next();
    System.out.println(k + ": " + r.get(k));
}
s.close();
</pre>
Thomas Mueller's avatar
Thomas Mueller committed
155 156
<p>
The default number of dimensions is 2. To use a different number of dimensions,
Thomas Mueller's avatar
Thomas Mueller committed
157
call <code>new MVRTreeMap.Builder&lt;String&gt;().dimensions(3)</code>.
Thomas Mueller's avatar
Thomas Mueller committed
158
The minimum number of dimensions is 1, the maximum is 32.
Thomas Mueller's avatar
Thomas Mueller committed
159
</p>
160 161 162

<h2 id="features">Features</h2>

163
<h3 id="maps">Maps</h3>
164
<p>
Thomas Mueller's avatar
Thomas Mueller committed
165
Each store contains a set of named maps.
166
A map is sorted by key, and supports the common lookup operations,
167 168
including access to the first and last key, iterate over some or all keys, and so on.
</p><p>
Thomas Mueller's avatar
Thomas Mueller committed
169
Also supported, and very uncommon for maps, is fast index lookup:
Thomas Mueller's avatar
Thomas Mueller committed
170 171 172 173
the entries of the map can be be efficiently accessed like a random-access list
(get the entry at the given index), and the index of a key can be calculated efficiently.
That also means getting the median of two keys is very fast,
and a range of keys can be counted very quickly.
174 175
The iterator supports fast skipping.
This is possible because internally, each map is organized in the form of a counted B+-tree.
176
</p><p>
177
In database terms, a map can be used like a table, where the key of the map is the primary key of the table,
178
and the value is the row. A map can also represent an index, where the key of the map is the key
Thomas Mueller's avatar
Thomas Mueller committed
179
of the index, and the value of the map is the primary key of the table (for non-unique indexes,
180
the key of the map must also contain the primary key).
181 182
</p>

183
<h3 id="versions">Versions</h3>
184 185
<p>
A version is a snapshot of all the data of all maps at a given point in time.
Thomas Mueller's avatar
Thomas Mueller committed
186
Creating a snapshot is fast: only those pages that are changed after a snapshot are copied.
Thomas Mueller's avatar
Thomas Mueller committed
187
This behavior is also called COW (copy on write).
Thomas Mueller's avatar
Thomas Mueller committed
188
Rollback to an old version is supported.
Thomas Mueller's avatar
Thomas Mueller committed
189
Old versions are readable until old data is purged.
Thomas Mueller's avatar
Thomas Mueller committed
190 191 192
</p><p>
The following sample code show how to create a store, open a map, add some data,
and access the current and an old version:
193
</p>
Thomas Mueller's avatar
Thomas Mueller committed
194 195 196 197 198 199 200 201 202 203 204 205
<pre>
// create/get the map named "data"
MVMap&lt;Integer, String&gt; map = s.openMap("data");

// add some data
map.put(1, "Hello");
map.put(2, "World");

// get the current version, for later use
long oldVersion = s.getCurrentVersion();

// from now on, the old version is read-only
Thomas Mueller's avatar
Thomas Mueller committed
206
s.commit();
Thomas Mueller's avatar
Thomas Mueller committed
207 208 209 210 211 212 213

// more changes, in the new version
// changes can be rolled back if required
// changes always go into "head" (the newest version)
map.put(1, "Hi");
map.remove(2);

Thomas Mueller's avatar
Thomas Mueller committed
214
// access the old data (before the commit)
Thomas Mueller's avatar
Thomas Mueller committed
215 216 217 218 219 220 221 222 223 224 225 226
MVMap&lt;Integer, String&gt; oldMap =
        map.openVersion(oldVersion);

// print the old version (can be done
// concurrently with further modifications)
// this will print "Hello" and "World":
System.out.println(oldMap.get(1));
System.out.println(oldMap.get(2));

// print the newest version ("Hi")
System.out.println(map.get(1));
</pre>
227

228 229 230 231
<h3 id="transactions">Transactions</h3>
<p>
To support multiple concurrent open transactions, a transaction utility is included,
the <code>TransactionStore</code>.
Thomas Mueller's avatar
Thomas Mueller committed
232 233 234 235 236
The tool supports PostgreSQL style "read committed" transaction isolation
with savepoints, two-phase commit, and other features typically available in a database.
There is no limit on the size of a transaction
(the log is written to disk for large or long running transactions).
</p><p>
Thomas Mueller's avatar
Thomas Mueller committed
237 238
Internally, this utility stores the old versions of changed entries in a separate map, similar to a transaction log,
except that entries of a closed transaction are removed, and the log is usually not stored for short transactions.
Thomas Mueller's avatar
Thomas Mueller committed
239
For common use cases, the storage overhead of this utility is very small compared to the overhead of a regular transaction log.
240 241 242
</p>

<h3 id="inMemory">In-Memory Performance and Usage</h3>
243
<p>
Thomas Mueller's avatar
Thomas Mueller committed
244 245
Performance of in-memory operations is comparable with <code>java.util.TreeMap</code>,
but usually slower than <code>java.util.HashMap</code>.
246 247
</p><p>
The memory overhead for large maps is slightly better than for the regular
248
map implementations, but there is a higher overhead per map.
Thomas Mueller's avatar
Thomas Mueller committed
249
For maps with less than about 25 entries, the regular map implementations need less memory.
Thomas Mueller's avatar
Thomas Mueller committed
250 251 252 253 254 255
</p><p>
If no file name is specified, the store operates purely in memory.
Except for persisting data, all features are supported in this mode
(multi-versioning, index lookup, R-tree and so on).
If a file name is specified, all operations occur in memory (with the same
performance characteristics) until data is persisted.
Thomas Mueller's avatar
Thomas Mueller committed
256
</p><p>
Thomas Mueller's avatar
Thomas Mueller committed
257 258
As in all map implementations, keys need to be immutable, that means
changing the key object after an entry has been added is not allowed.
Thomas Mueller's avatar
Thomas Mueller committed
259
If a file name is specified, the value may also not be changed after
Thomas Mueller's avatar
Thomas Mueller committed
260
adding an entry, because it might be serialized
Thomas Mueller's avatar
Thomas Mueller committed
261
(which could happen at any time when autocommit is enabled).
262 263
</p>

264
<h3 id="dataTypes">Pluggable Data Types</h3>
265
<p>
266
Serialization is pluggable. The default serialization currently supports many common data types,
267 268
and uses Java serialization for other objects. The following classes are currently directly supported:
<code>Boolean, Byte, Short, Character, Integer, Long, Float, Double, BigInteger, BigDecimal,
Thomas Mueller's avatar
Thomas Mueller committed
269
String, UUID, Date</code> and arrays (both primitive arrays and object arrays).
270
For serialized objects, the size estimate is adjusted using an exponential moving average.
271 272
</p><p>
Parameterized data types are supported
Thomas Mueller's avatar
Thomas Mueller committed
273
(for example one could build a string data type that limits the length).
274
</p><p>
275
The storage engine itself does not have any length limits, so that keys, values,
276 277 278 279 280
pages, and chunks can be very big (as big as fits in memory).
Also, there is no inherent limit to the number of maps and chunks.
Due to using a log structured storage, there is no special case handling for large keys or pages.
</p>

281
<h3 id="blob">BLOB Support</h3>
282
<p>
283
There is a mechanism that stores large binary objects by splitting them into smaller blocks.
284 285
This allows to store objects that don't fit in memory.
Streaming as well as random access reads on such objects are supported.
Thomas Mueller's avatar
Thomas Mueller committed
286
This tool is written on top of the store, using only the map interface.
287 288
</p>

289
<h3 id="pluggableMap">R-Tree and Pluggable Map Implementations</h3>
290 291
<p>
The map implementation is pluggable.
Thomas Mueller's avatar
Thomas Mueller committed
292
In addition to the default <code>MVMap</code> (multi-version map),
Thomas Mueller's avatar
Thomas Mueller committed
293 294
there is a map that supports concurrent write operations,
and a multi-version R-tree map implementation for spatial operations.
295 296
</p>

297
<h3 id="caching">Concurrent Operations and Caching</h3>
298
<p>
299
The default map implementation supports concurrent reads on old versions of the data.
300
All such read operations can occur in parallel. Concurrent reads from the page cache,
301
as well as concurrent reads from the file system are supported.
Thomas Mueller's avatar
Thomas Mueller committed
302 303
Writing changes to the file can occur concurrently to modifying the data,
as writing operates on a snapshot.
304
</p><p>
305
Caching is done on the page level.
306
The page cache is a concurrent LIRS cache, which should be resistant against scan operations.
307
</p><p>
308
The default map implementation does not support concurrent modification
309
operations on a map (the same as <code>HashMap</code> and <code>TreeMap</code>).
Thomas Mueller's avatar
Thomas Mueller committed
310
Similar to those classes, the map tries to detect concurrent modifications.
311
</p><p>
312
With the <code>MVMapConcurrent</code> implementation,
313 314
read operations even on the newest version can happen concurrently with all other
operations, without risk of corruption.
315
This comes with slightly reduced speed in single threaded mode,
316
the same as with other <code>ConcurrentHashMap</code> implementations.
Thomas Mueller's avatar
Thomas Mueller committed
317
Write operations first read the relevant pages from disk to memory
Thomas Mueller's avatar
Thomas Mueller committed
318
(this can happen concurrently), and only then modify the data.
Thomas Mueller's avatar
Thomas Mueller committed
319
The in-memory parts of write operations are synchronized.
320
</p><p>
321 322
For fully scalable concurrent write operations to a map (in-memory and to disk),
the map could be split into multiple maps in different stores ('sharding').
323
The plan is to add such a mechanism later when needed.
324 325
</p>

326
<h3 id="logStructured">Log Structured Storage</h3>
Thomas Mueller's avatar
Thomas Mueller committed
327
<p>
Thomas Mueller's avatar
Thomas Mueller committed
328
Internally, changes are buffered in memory, and once enough changes have accumulated,
Thomas Mueller's avatar
Thomas Mueller committed
329
they are written in one continuous disk write operation.
Thomas Mueller's avatar
Thomas Mueller committed
330 331 332
Compared to traditional database storage engines,
this should improve write performance for file systems and storage systems
that do not efficiently support small random writes, such as Btrfs, as well as SSDs.
Thomas Mueller's avatar
Thomas Mueller committed
333
(According to a test, write throughput of a common SSD increases with write block size,
334
until a block size of 2 MB, and then does not further increase.)
Thomas Mueller's avatar
Thomas Mueller committed
335
By default, changes are automatically written when more than a number of pages are modified,
Thomas Mueller's avatar
Thomas Mueller committed
336 337
and once every second in a background thread, even if only little data was changed.
Changes can also be written explicitly by calling <code>commit()</code>.
Thomas Mueller's avatar
Thomas Mueller committed
338 339
</p><p>
When storing, all changed pages are serialized,
340
optionally compressed using the LZF algorithm,
Thomas Mueller's avatar
Thomas Mueller committed
341 342 343 344
and written sequentially to a free area of the file.
Each such change set is called a chunk.
All parent pages of the changed B-trees are stored in this chunk as well,
so that each chunk also contains the root of each changed map
Thomas Mueller's avatar
Thomas Mueller committed
345
(which is the entry point for reading this version of the data).
Thomas Mueller's avatar
Thomas Mueller committed
346
There is no separate index: all data is stored as a list of pages.
Thomas Mueller's avatar
Thomas Mueller committed
347
Per store, there is one additional map that contains the metadata (the list of
Thomas Mueller's avatar
Thomas Mueller committed
348 349
maps, where the root page of each map is stored, and the list of chunks).
</p><p>
350 351 352
There are usually two write operations per chunk:
one to store the chunk data (the pages), and one to update the file header (so it points to the latest chunk).
If the chunk is appended at the end of the file, the file header is only written at the end of the chunk.
Thomas Mueller's avatar
Thomas Mueller committed
353
There is no transaction log, no undo log,
Thomas Mueller's avatar
Thomas Mueller committed
354
and there are no in-place updates (however, unused chunks are overwritten by default).
Thomas Mueller's avatar
Thomas Mueller committed
355
</p><p>
356
Old data is kept for at least 45 seconds (configurable),
Thomas Mueller's avatar
Thomas Mueller committed
357 358
so that there are no explicit sync operations required to guarantee data consistency.
An application can also sync explicitly when needed.
Thomas Mueller's avatar
Thomas Mueller committed
359
To reuse disk space, the chunks with the lowest amount of live data are compacted
Thomas Mueller's avatar
Thomas Mueller committed
360
(the live data is stored again in the next chunk).
Thomas Mueller's avatar
Thomas Mueller committed
361 362
To improve data locality and disk space usage, the plan is to automatically defragment and compact data.
</p><p>
Thomas Mueller's avatar
Thomas Mueller committed
363
Compared to traditional storage engines (that use a transaction log, undo log, and main storage area),
Thomas Mueller's avatar
Thomas Mueller committed
364 365 366 367 368 369 370
the log structured storage is simpler, more flexible, and typically needs less disk operations per change,
as data is only written once instead of twice or 3 times, and because the B-tree pages are
always full (they are stored next to each other) and can be easily compressed.
But temporarily, disk space usage might actually be a bit higher than for a regular database,
as disk space is not immediately re-used (there are no in-place updates).
</p>

371 372
<h3 id="offHeap">Off-Heap and Pluggable Storage</h3>
<p>
Thomas Mueller's avatar
Thomas Mueller committed
373
Storage is pluggable. Unless pure in-memory operation is used, the default storage is to a single file.
374 375 376 377
</p>
<p>
An off-heap storage implementation is available. This storage keeps the data in the off-heap memory,
meaning outside of the regular garbage collected heap. This allows to use very large in-memory
Thomas Mueller's avatar
Thomas Mueller committed
378 379
stores without having to increase the JVM heap, which would increase Java garbage collection
pauses a lot. Memory is allocated using <code>ByteBuffer.allocateDirect</code>.
380
One chunk is allocated at a time (each chunk is usually a few MB large), so that
381
allocation cost is low. To use the off-heap storage, call:
382
</p>
383 384 385 386 387
<pre>
OffHeapStore offHeap = new OffHeapStore();
MVStore s = new MVStore.Builder().
        fileStore(offHeap).open();
</pre>
388

389
<h3 id="fileSystem">File System Abstraction, File Locking and Online Backup</h3>
390
<p>
Thomas Mueller's avatar
Thomas Mueller committed
391
The file system is pluggable. The same file system abstraction is used as H2 uses.
392
The file can be encrypted using a encrypting file system wrapper.
Thomas Mueller's avatar
Thomas Mueller committed
393
Other file system implementations support reading from a compressed zip or jar file.
394
The file system abstraction closely matches the Java 7 file system API.
395 396 397 398 399 400 401 402
</p>
<p>
Each store may only be opened once within a JVM.
When opening a store, the file is locked in exclusive mode, so that
the file can only be changed from within one process.
Files can be opened in read-only mode, in which case a shared lock is used.
</p>
<p>
403
The persisted data can be backed up at any time,
404
even during write operations (online backup).
405
To do that, automatic disk space reuse needs to be first disabled, so that
406
new data is always appended at the end of the file.
Thomas Mueller's avatar
Thomas Mueller committed
407
Then, the file can be copied. The file handle is available to the application.
408
It is recommended to use the utility class <code>FileChannelInputStream</code> to do this.
Thomas Mueller's avatar
Thomas Mueller committed
409
For encrypted databases, both the encrypted (raw) file content,
410
as well as the clear text content, can be backed up.
411 412
</p>

413
<h3 id="encryption">Encrypted Files</h3>
414
<p>
415
File encryption ensures the data can only be read with the correct password.
416 417 418 419 420 421 422 423 424
Data can be encrypted as follows:
</p>
<pre>
MVStore s = new MVStore.Builder().
    fileName(fileName).
    encryptionKey("007".toCharArray()).
    open();
</pre>
<p>
425
</p><p>
Thomas Mueller's avatar
Thomas Mueller committed
426
The following algorithms and settings are used:
427
</p>
428
<ul><li>The password char array is cleared after use,
429 430
    to reduce the risk that the password is stolen
    even if the attacker has access to the main memory.
431
</li><li>The password is hashed according to the PBKDF2 standard,
432
    using the SHA-256 hash algorithm.
Thomas Mueller's avatar
Thomas Mueller committed
433
</li><li>The length of the salt is 64 bits,
434
    so that an attacker can not use a pre-calculated password hash table (rainbow table).
Thomas Mueller's avatar
Thomas Mueller committed
435 436 437 438 439 440 441
    It is generated using a cryptographically secure random number generator.
</li><li>To speed up opening an encrypted stores on Android,
    the number of PBKDF2 iterations is 10.
    The higher the value, the better the protection against brute-force password cracking attacks,
    but the slower is opening a file.
</li><li>The file itself is encrypted using the standardized disk encryption mode XTS-AES.
    Only little more than one AES-128 round per block is needed.
442
</li></ul>
443

444
<h3 id="tools">Tools</h3>
445
<p>
Thomas Mueller's avatar
Thomas Mueller committed
446
There is a tool, the <code>MVStoreTool</code>, to dump the contents of a file.
447
</p>
448

449
<h3 id="exceptionHandling">Exception Handling</h3>
450
<p>
451 452
This tool does not throw checked exceptions.
Instead, unchecked exceptions are thrown if needed.
453 454 455
The error message always contains the version of the tool.
The following exceptions can occur:
</p>
456
<ul><li><code>IllegalStateException</code> if a map was already closed or
457 458 459
    an IO exception occurred, for example if the file was locked, is already closed,
    could not be opened or closed, if reading or writing failed,
    if the file is corrupt, or if there is an internal error in the tool.
Thomas Mueller's avatar
Thomas Mueller committed
460
    For such exceptions, an error code is added
Thomas Mueller's avatar
Thomas Mueller committed
461
    so that the application can distinguish between different error cases.
462 463
</li><li><code>IllegalArgumentException</code> if a method was called with an illegal argument.
</li><li><code>UnsupportedOperationException</code> if a method was called that is not supported,
Thomas Mueller's avatar
Thomas Mueller committed
464 465
    for example trying to modify a read-only map.
</li><li><code>ConcurrentModificationException</code> if a map is modified concurrently.
466
</li></ul>
467

Thomas Mueller's avatar
Thomas Mueller committed
468
<h3 id="storageEngine">Storage Engine for H2</h3>
Thomas Mueller's avatar
Thomas Mueller committed
469
<p>
Thomas Mueller's avatar
Thomas Mueller committed
470
For H2 version 1.4 and newer, the MVStore is the default storage engine
Thomas Mueller's avatar
Thomas Mueller committed
471 472
(supporting SQL, JDBC, transactions, MVCC, and so on).
For older versions, append
Thomas Mueller's avatar
Thomas Mueller committed
473
<code>;MV_STORE=TRUE</code>
Thomas Mueller's avatar
Thomas Mueller committed
474
to the database URL.
noelgrandin's avatar
noelgrandin committed
475
Even though it can be used with the default table level locking,
Thomas Mueller's avatar
Thomas Mueller committed
476
by default the MVCC mode is enabled when using the MVStore.
Thomas Mueller's avatar
Thomas Mueller committed
477 478
</p>

479 480
<h2 id="fileFormat">File Format</h2>
<p>
481 482
The data is stored in one file.
The file contains two file headers (for safety), and a number of chunks.
483
The file headers are one block each; a block is 4096 bytes.
484
Each chunk is at least one block, but typically 200 blocks or more.
485
Data is stored in the chunks in the form of a
486
<a href="https://en.wikipedia.org/wiki/Log-structured_file_system">log structured storage</a>.
487 488 489
There is one chunk for every version.
</p>
<pre>
490
[ file header 1 ] [ file header 2 ] [ chunk ] [ chunk ] ... [ chunk ]
491
</pre>
492 493 494 495 496 497
<p>
Each chunk contains a number of B-tree pages.
As an example, the following code:
</p>
<pre>
MVStore s = MVStore.open(fileName);
498 499
MVMap&lt;Integer, String&gt; map = s.openMap("data");
for (int i = 0; i &lt; 400; i++) {
500 501 502
    map.put(i, "Hello");
}
s.commit();
503
for (int i = 0; i &lt; 100; i++) {
504 505 506 507 508 509 510 511 512
    map.put(0, "Hi");
}
s.commit();
s.close();
</pre>
<p>
will result in the following two chunks (excluding metadata):
</p>
<p>
513
<b>Chunk 1:</b><br />
514 515 516
- Page 1: (root) node with 2 entries pointing to page 2 and 3<br />
- Page 2: leaf with 140 entries (keys 0 - 139)<br />
- Page 3: leaf with 260 entries (keys 140 - 399)<br />
517 518
</p>
<p>
519
<b>Chunk 2:</b><br />
520 521
- Page 4: (root) node with 2 entries pointing to page 3 and 5<br />
- Page 5: leaf with 140 entries (keys 0 - 139)<br />
522 523
</p>
<p>
524
That means each chunk contains the changes of one version:
525
the new version of the changed pages and the parent pages, recursively, up to the root page.
526
Pages in subsequent chunks refer to pages in earlier chunks.
527
</p>
528 529 530 531

<h3>File Header</h3>
<p>
There are two file headers, which normally contain the exact same data.
532 533 534
But once in a while, the file headers are updated, and writing could partially fail,
which could corrupt a header. That's why there is a second header.
Only the file headers are updated in this way (called "in-place update").
535
The headers contain the following data:
536 537 538 539 540
</p>
<pre>
H:2,block:2,blockSize:1000,chunk:7,created:1441235ef73,format:1,version:7,fletcher:3044e6cc
</pre>
<p>
541
The data is stored in the form of a key-value pair.
542 543
Each value is stored as a hexadecimal number. The entries are:
</p>
544
<ul><li>H: The entry "H:2" stands for the the H2 database.
545 546 547 548 549
</li><li>block: The block number where one of the newest chunks starts
    (but not necessarily the newest).
</li><li>blockSize: The block size of the file; currently always hex 1000, which is decimal 4096,
    to match the <a href="https://en.wikipedia.org/wiki/Disk_sector">disk sector</a>
    length of modern hard disks.
550
</li><li>chunk: The chunk id, which is normally the same value as the version;
551
    however, the chunk id might roll over to 0, while the version doesn't.
552 553 554
</li><li>created: The number of milliseconds since 1970 when the file was created.
</li><li>format: The file format number. Currently 1.
</li><li>version: The version number of the chunk.
555 556
</li><li>fletcher: The <a href="https://en.wikipedia.org/wiki/Fletcher's_checksum">
    Fletcher-32 checksum</a> of the header.
557 558 559
</li></ul>
<p>
When opening the file, both headers are read and the checksum is verified.
560 561 562
If both headers are valid, the one with the newer version is used.
The chunk with the latest version is then detected (details about this see below),
and the rest of the metadata is read from there.
563
If the chunk id, block and version are not stored in the file header,
564
then the latest chunk lookup starts with the last chunk in the file.
565
</p>
566 567
<p>
</p>
568 569 570 571

<h3>Chunk Format</h3>
<p>
There is one chunk per version.
572 573 574 575 576 577 578 579 580 581
Each chunk consists of a header, the pages that were modified in this version, and a footer.
The pages contain the actual data of the maps.
The pages inside a chunk are stored right after the header, next to each other (unaligned).
The size of a chunk is a multiple of the block size.
The footer is stored in the last 128 bytes of the chunk.
</p>
<pre>
[ header ] [ page ] [ page ] ... [ page ] [ footer ]
</pre>
<p>
582
The footer allows to verify that the chunk is completely written (a chunk is written as one write operation),
583
and allows to find the start position of the very last chunk in the file.
584
The chunk header and footer contain the following data:
585 586
</p>
<pre>
587 588
chunk:1,block:2,len:1,map:6,max:1c0,next:3,pages:2,root:4000004f8c,time:1fc,version:1
chunk:1,block:2,version:1,fletcher:aed9a4f6
589 590
</pre>
<p>
591 592 593 594 595 596
The fields of the chunk header and footer are:
</p>
<ul><li>chunk: The chunk id.
</li><li>block: The first block of the chunk (multiply by the block size to get the position in the file).
</li><li>len: The size of the chunk in number of blocks.
</li><li>map: The id of the newest map; incremented when a new map is created.
597
</li><li>max: The sum of all maximum page sizes (see page format).
598 599 600 601 602 603 604 605
</li><li>next: The predicted start block of the next chunk.
</li><li>pages: The number of pages in the chunk.
</li><li>root: The position of the metadata root page (see page format).
</li><li>time: The time the chunk was written, in milliseconds after the file was created.
</li><li>version: The version this chunk represents.
</li><li>fletcher: The checksum of the footer.
</li></ul>
<p>
606 607
Chunks are never updated in-place. Each chunk contains the pages that were
changed in that version (there is one chunk per version, see above),
608
plus all the parent nodes of those pages, recursively, up to the root page.
609 610
If an entry in a map is changed, removed, or added, then the respective page is copied,
modified, and stored in the next chunk, and the number of live pages in the old chunk is decremented.
611 612
This mechanism is called copy-on-write, and is similar to how the
<a href="https://en.wikipedia.org/wiki/Btrfs">Btrfs</a> file system works.
613
Chunks without live pages are marked as free, so the space can be re-used by more recent chunks.
614
Because not all chunks are of the same size, there can be a number of free blocks in front of a chunk
615
for some time (until a small chunk is written or the chunks are compacted).
616
There is a <a href="http://stackoverflow.com/questions/13650134/after-how-many-seconds-are-file-system-write-buffers-typically-flushed">
617 618
delay of 45 seconds</a> (by default) before a free chunk is overwritten,
to ensure new versions are persisted first.
619 620 621 622 623
</p>
<p>
How the newest chunk is located when opening a store:
The file header contains the position of a recent chunk, but not always the newest one.
This is to reduce the number of file header updates.
624
After opening the file, the file headers, and the chunk footer of the very last chunk
625 626 627 628 629
(at the end of the file) are read.
From those candidates, the header of the most recent chunk is read.
If it contains a "next" pointer (see above), those chunk's header and footer are read as well.
If it turned out to be a newer valid chunk, this is repeated, until the newest chunk was found.
Before writing a chunk, the position of the next chunk is predicted based on the assumption
630
that the next chunk will be of the same size as the current one.
631 632 633 634 635 636 637
When the next chunk is written, and the previous
prediction turned out to be incorrect, the file header is updated as well.
In any case, the file header is updated if the next chain gets longer than 20 hops.
</p>

<h3>Page Format</h3>
<p>
638
Each map is a <a href="https://en.wikipedia.org/wiki/B-tree">B-tree</a>,
639
and the map data is stored in (B-tree-) pages.
640
There are leaf pages that contain the key-value pairs of the map,
641 642 643
and internal nodes, which only contain keys and pointers to leaf pages.
The root of a tree is either a leaf or an internal node.
Unlike file header and chunk header and footer, the page data is not human readable.
644 645
Instead, it is stored as byte arrays, with long (8 bytes), int (4 bytes), short (2 bytes),
and <a href="https://en.wikipedia.org/wiki/Variable-length_quantity">variable size int and long</a>
646
(1 to 5 / 10 bytes). The page format is:
647 648 649 650 651 652
</p>
<ul><li>length (int): Length of the page in bytes.
</li><li>checksum (short): Checksum (chunk id xor offset within the chunk xor page length).
</li><li>mapId (variable size int): The id of the map this page belongs to.
</li><li>len (variable size int): The number of keys in the page.
</li><li>type (byte): The page type (0 for leaf page, 1 for internal node;
653 654
    plus 2 if the keys and values are compressed with the LZF algorithm, or
    plus 6 if the keys and values are compressed with the Deflate algorithm).
655
</li><li>children (array of long; internal nodes only): The position of the children.
656
</li><li>childCounts (array of variable size long; internal nodes only):
657
    The total number of entries for the given child page.
658
</li><li>keys (byte array): All keys, stored depending on the data type.
659 660 661
</li><li>values (byte array; leaf pages only): All values, stored depending on the data type.
</li></ul>
<p>
662
Even though this is not required by the file format, pages are stored in the following order:
Thomas Mueller's avatar
Thomas Mueller committed
663
For each map, the root page is stored first, then the internal nodes (if there are any),
664 665 666
and then the leaf pages.
This should speed up reads for media where sequential reads are faster than random access reads.
The metadata map is stored at the end of a chunk.
667 668
</p>
<p>
669
Pointers to pages are stored as a long, using a special format:
670
26 bits for the chunk id, 32 bits for the offset within the chunk, 5 bits for the length code,
671
1 bit for the page type (leaf or internal node).
672 673 674 675 676
The page type is encoded so that when clearing or removing a map, leaf pages don't
have to be read (internal nodes do have to be read in order to know where all the pages are;
but in a typical B-tree the vast majority of the pages are leaf pages).
The absolute file position is not included so that chunks can be
moved within the file without having to change page pointers;
677
only the chunk metadata needs to be changed.
678 679 680
The length code is a number from 0 to 31, where 0 means the maximum length
of the page is 32 bytes, 1 means 48 bytes, 2: 64, 3: 96, 4: 128, 5: 192, and so on until 31 which
means longer than 1 MB. That way, reading a page only requires one
Thomas Mueller's avatar
Thomas Mueller committed
681
read operation (except for very large pages).
682 683
The sum of the maximum length of all pages is stored in the chunk metadata (field "max"),
and when a page is marked as removed, the live maximum length is adjusted.
684 685 686
This allows to estimate the amount of free space within a block, in addition to the number of free pages.
</p>
<p>
687
The total number of entries in child pages are kept to allow efficient range counting,
688
lookup by index, and skip operations.
689
The pages form a <a href="http://www.chiark.greenend.org.uk/~sgtatham/algorithms/cbtree.html">counted B-tree</a>.
690 691 692
</p>
<p>
Data compression: The data after the page type are optionally compressed using the LZF algorithm.
693 694
</p>

695 696
<h3>Metadata Map</h3>
<p>
697
In addition to the user maps, there is one metadata map that contains names and
698 699
positions of user maps, and chunk metadata.
The very last page of a chunk contains the root page of that metadata map.
700
The exact position of this root page is stored in the chunk header.
701 702 703 704 705 706 707 708 709
This page (directly or indirectly) points to the root pages of all other maps.
The metadata map of a store with a map named "data", and one chunk,
contains the following entries:
</p>
<ul><li>chunk.1: The metadata of chunk 1. This is the same data as the chunk header,
    plus the number of live pages, and the maximum live length.
</li><li>map.1: The metadata of map 1. The entries are: name, createVersion, and type.
</li><li>name.data: The map id of the map named "data". The value is "1".
</li><li>root.1: The root position of map 1.
Thomas Mueller's avatar
Thomas Mueller committed
710
</li><li>setting.storeVersion: The store version (a user defined value).
711
</li></ul>
712

713 714
<h2 id="differences">Similar Projects and Differences to Other Storage Engines</h2>
<p>
715
Unlike similar storage engines like LevelDB and Kyoto Cabinet,
Thomas Mueller's avatar
Thomas Mueller committed
716 717
the MVStore is written in Java
and can easily be embedded in a Java and Android application.
718
</p><p>
719
The MVStore is somewhat similar to the Berkeley DB Java Edition
Thomas Mueller's avatar
Thomas Mueller committed
720
because it is also written in Java,
721
and is also a log structured storage, but the H2 license is more liberal.
722
</p><p>
Thomas Mueller's avatar
Thomas Mueller committed
723 724 725 726
Like SQLite 3, the MVStore keeps all data in one file.
Unlike SQLite 3, the MVStore uses is a log structured storage.
The plan is to make the MVStore both easier to use as well as faster than SQLite 3.
In a recent (very simple) test, the MVStore was about twice as fast as SQLite 3 on Android.
727 728
</p><p>
The API of the MVStore is similar to MapDB (previously known as JDBM) from Jan Kotek,
Thomas Mueller's avatar
Thomas Mueller committed
729
and some code is shared between MVStore and MapDB.
730
However, unlike MapDB, the MVStore uses is a log structured storage.
Thomas Mueller's avatar
Thomas Mueller committed
731
The MVStore does not have a record size limit.
732 733 734 735
</p>

<h2 id="current_state">Current State</h2>
<p>
Thomas Mueller's avatar
Thomas Mueller committed
736 737
The code is still experimental at this stage.
The API as well as the behavior may partially change.
noelgrandin's avatar
noelgrandin committed
738
Features may be added and removed (even though the main features will stay).
739 740 741 742
</p>

<h2 id="requirements">Requirements</h2>
<p>
Thomas Mueller's avatar
Thomas Mueller committed
743 744 745
The MVStore is included in the latest H2 jar file.
</p><p>
There are no special requirements to use it.
Thomas Mueller's avatar
Thomas Mueller committed
746
The MVStore should run on any JVM as well as on Android.
747 748 749 750 751 752 753
</p><p>
To build just the MVStore (without the database engine), run:
</p>
<pre>
./build.sh jarMVStore
</pre>
<p>
754
This will create the file <code>bin/h2mvstore-${version}.jar</code> (about 200 KB).
755 756 757
</p>

<!-- [close] { --></div></td></tr></table><!-- } --><!-- analytics --></body></html>